---
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resource: https://arxiv.org/pdf/2605.28787
tags: []
timestamp: 2026-08-22T09:15:18.165041Z
---

Do Data Agents Need Semantic Metadata? A
Comparative Study in Agentic Data Retrieval
Shiyu Chen, Tarfah Alrashed, Alon Halevy, and Natasha Noy
Google, Mountain View, CA, USA
{shiyuc,tarfah,halevy,noy}@google.com
Abstract. In the era of autonomous agents, machine-actionable data
is critical for data-driven workflows. For more than a decade, semantic
metadata like schema.org has anchored the FAIR principles (Findable,
Accessible,Interoperable,andReusable)formachine-actionabledataand
enableddiscoverytoolslikeGoogleDatasetSearch.However,theriseof
Large Language Models (LLMs) capable of navigating the unstructured
web raises a fundamental question: Is semantic metadata still necessary
foragenticdatadiscovery,orcanagentsreliablyretrieveactionabledata
directly from the web? We present a comparative analysis of agentic
dataretrievalacrosstwodistinctenvironments:aBaselineAgentsearch-
ing billions of open-web documents, and a Semantic Agent leveraging
a corpus of 90 million datasets using schema.org. We deploy an “LLM-
as-a-judge” evaluationpipeline,mappeddirectlytotheFAIRprinciples,
to assess the semantic relevance, data accessibility, and computational
utility of the retrieved data. Our results reveal a clear divergence. The
Semantic Agent excels at retrieving actionable data, achieving a 44.9%
higherprecisionformetadata-richregistriesanda46.6%higherprecision
for pages with machine-readable downloads among its returned results.
Conversely,theBaselineAgentfrequentlysuffers“Last-MileUtility” fail-
ures, retrieving prose-heavy pages (20.1% of results) and portal landing
pages (8.5%) rather than actual data pages. While the Baseline Agent
achieveshighercoveragebyanswering40%morequestions,theSemantic
Agentdeliversgreateraccuracy,achieving65.7%higheroverallprecision
inretrievingFAIR-compliantdatasets.Weconcludethatwhileunstruc-
tured retrieval supports broad exploratory tasks, structured ecosystems
remain the indispensable foundation for reliable, execution-oriented au-
tonomous workflows.
Keywords: Semantic Metadata · Data Discovery · Large Language Models ·
Autonomous Agents · Retrieval-Augmented Generation
1 Introduction
Astheworldbecomesincreasinglydata-driven,researchersandpractitionersrely
heavily on open data to answer scientific questions and to understand complex
phenomena[38].Thisdeeprelianceondatahascatalyzedashiftinscientificcom-
munication,makingpublicationofprimarydatathenormacrossmanyscientific
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2 S. Chen et al.
disciplines [31]. Users do not merely need to read about data; they frequently
needtofinditandtoactuponit—forexample,toconductindependentanalyses
of primary sources or to replicate experimental results.
Today,therearetensofmillionsofdatasetsscatteredacrosstheWeb.Finding
specific, usable data in this vast, unstructured space is a massive challenge [4].
We built Google Dataset Search [22] specifically for this use case. Recognizing
thattraditionalWebsearchenginesareoptimizedfornarrativeproseratherthan
structured data, we relied on semantic metadata—specifically schema.org [11]
and W3C DCAT [2][3]—to construct a dedicated vertical search engine. By in-
centivizing publishers to add explicit semantic metadata for the datasets, this
structuredecosystemorganizedthechaoticsubsetoftheWebdescribingdatasets
into a reliable, deterministic corpus for data discovery [5].
Historically, semantic metadata facilitated the FAIR principles—ensuring
data is Findable, Accessible, Interoperable, and Reusable [34]. These princi-
ples emphasize machine-actionability: the capacity for computational systems
to utilize this data with minimal human intervention. Today, the emergence of
autonomousagents[35,25,28]transformsFAIRfromahuman-centricbestprac-
tice into a technical requirement. For an agent, findability is merely the starting
point.Bridgingthegaptodataexecutionrequiresmachine-actionableaccessibil-
ity—such as direct APIs and machine-readable formats—so agents can process
thedataseamlessly.Furthermore,interoperability viasemanticattributesensures
agents understand dataset schemas, streamlining the integration of extracted
data into downstream workflows. Finally, reusability provides the provenance
and licensing context needed to verify whether or not it is appropriate for the
agent to use the asset, preventing the blind extraction of unverified data. Ulti-
mately, the advent of agents does not diminish the need for FAIR data; rather,
it makes FAIR the essential foundation for reliable autonomous workflows.
Simultaneously,modernLLMshavedemonstratedaremarkablecapabilityto
navigate the unstructured web directly. A dataset-discovery agent built entirely
ontraditionalwebsearch[21,37]canextractcontextstraightfromHTMLprose,
effectively bypassing traditional metadata structures. This mechanism stands in
contrasttothestructuredecosystemoftheSemanticWeb,wheresemanticmeta-
data constitutes the ground truth—unambiguous, machine-readable statements
guaranteeingschemaandprovenance.ThecapabilitywithwhichLLMsnavigate
theunstructuredpagesraisesacriticalquestion:ifanagentlocatesdatawithout
these semantic guarantees, is that asset truly FAIR and actionable, or simply
findable?
Thisfrictiondrivesourcoreresearchquestion:Inanagent-ledsystem,dowe
still need semantic metadata to empower data discovery, or can LLMs natively
bridge the gap through unstructured retrieval?
To answer this question, we present a comparative analysis of agentic data
retrievalacrosstwoenvironments:Usingasimilaragentarchitecture,weevaluate
a Baseline Agent (billions of open-web documents accessed via general web
search)againstaSemantic Agent.TheSemanticAgentoperatesoveracorpus

|     |     |     |     | Do Data | Agents | Need | Semantic | Metadata? |     | 3   |
| --- | --- | --- | --- | ------- | ------ | ---- | -------- | --------- | --- | --- |
of90milliondatasetmetadatarecordsfromGoogleDatasetSearch,whichrelies
| on the presence | of        | schema.org |     | semantic      | markup | (Section |        | 3).                 |     |     |
| --------------- | --------- | ---------- | --- | ------------- | ------ | -------- | ------ | ------------------- | --- | --- |
| To assess       | retrieval | quality    |     | in a scalable |        | way, we  | deploy | a multi-dimensional |     |     |
“LLM-as-a-judge” pipeline [36] mapped directly to the FAIR principles. Using
keyword-based queries from the NTCIR-16 Data Search benchmark [15], our
autoraters evaluate the retrieved assets across semantic relevance, data accessi-
| bility, and   | computational |          | utility   | (Section | 4).   |                 |     |            |     |     |
| ------------- | ------------- | -------- | --------- | -------- | ----- | --------------- | --- | ---------- | --- | --- |
| The following |               | research | questions |          | drive | our comparative |     | framework: |     |     |
– Data Actionability:Doessemanticmetadataprovideanadvantageinsur-
| facing actionable |             | datasets |              | compared | to           | unstructured  |                  | web search     | systems?    |          |
| ----------------- | ----------- | -------- | ------------ | -------- | ------------ | ------------- | ---------------- | -------------- | ----------- | -------- |
| Hypothesis:       | Semantic    |          | Agent        | will     | yield a      | significantly |                  | higher success |             | rate for |
| locating          | actionable, |          | downloadable |          | datasets.    |               |                  |                |             |          |
|                   |             |          | Utility:     | When     | unstructured |               | web              | search         | fails in    | iden-    |
| – The “Last       | Mile”       |          |              |          |              |               |                  |                |             |          |
| tifying           | actionable  | data,    | what         | is       | the reason?  |               | Is it contextual |                | divergence— |          |
wherethemodellosesfocusonthedataobjectiveinfavorofthesurrounding
| prose—or    | explicit | hallucination?  |     |         | Hypothesis: | Baseline  |           | Agent often | fails | the     |
| ----------- | -------- | --------------- | --- | ------- | ----------- | --------- | --------- | ----------- | ----- | ------- |
| “last mile” | of       | data retrieval, |     | landing | on          | web pages | requiring | further     |       | naviga- |
| tion or     | complex  | extraction      |     | rather  | than        | immediate | data      | payloads.   |       |         |
– Exploratory Breadth vs. Precision: How do the two agents balance ex-
| ploratory | recall | against | retrieval |     | precision? |     |     | The Baseline |     | Agent |
| --------- | ------ | ------- | --------- | --- | ---------- | --- | --- | ------------ | --- | ----- |
Hypothesis:
| will achieve | higher | overall |     | query | recall | by acting | as a | broader | discovery | su- |
| ------------ | ------ | ------- | --- | ----- | ------ | --------- | ---- | ------- | --------- | --- |
persetfornichetopicslackingsemanticmarkup,whereastheSemanticAgent
| will deliver | significantly |       | higher | precision |           | and more       | focused | results. |     |     |
| ------------ | ------------- | ----- | ------ | --------- | --------- | -------------- | ------- | -------- | --- | --- |
| In summary,  | this          | paper | makes  | the       | following | contributions: |         |          |     |     |
– We provide a comparative study evaluating the end-to-end utility of a se-
| mantic       | metadata | ecosystem            |     | for | agentic        | data retrieval. |            |     |          |      |
| ------------ | -------- | -------------------- | --- | --- | -------------- | --------------- | ---------- | --- | -------- | ---- |
| We introduce |          | a multi-dimensional, |     |     | LLM-as-a-judge |                 | evaluation |     | pipeline | that |
–
translatesthehuman-centricFAIRdataprinciplesintometricsforautonomous
| systems,   | extending | evaluation |         | beyond | traditional |                | semantic | relevance. |      |        |
| ---------- | --------- | ---------- | ------- | ------ | ----------- | -------------- | -------- | ---------- | ---- | ------ |
| We publish | the       | exact      | prompts | used   | by          | our autoraters |          | to ensure  | full | trans- |
–
| parency   | and foster | reproducibility |     |     | of our | LLM-as-a-judge |     | methodologies. |     |     |
| --------- | ---------- | --------------- | --- | --- | ------ | -------------- | --- | -------------- | --- | --- |
| 2 Related | Work       |                 |     |     |        |                |     |                |     |     |
The challenge of agentic data retrieval sits at the intersection of RAG, dataset
discovery,andSemanticWebtechnologies.DespitethereasoningpowerofLLMs,
integrating them with external search remains a research challenge, specifically
| regarding data | reliability |     | and | utility. |           |            |     |        |       |     |
| -------------- | ----------- | --- | --- | -------- | --------- | ---------- | --- | ------ | ----- | --- |
|                |             |     |     |          |           | Autonomous |     | agents | built | on  |
| Autonomous     | Agents      |     | and | Web      | Retrieval |            |     |        |       |     |
RAG[16]leverageframeworkslikeReAct[35],Toolformer[28],andToolLLM[27]
for multi-step reasoning and tool execution. For web tasks, systems such as We-
bGPT[21]andWebArena[37]demonstratethatagentscannavigaterawHTML

4 S. Chen et al.
tofulfillcomplexintents,butDOMtraversalintroduceshighcomputationalover-
headandboilerplatenoisethatdegradesreasoning[12].Althoughdistillingpages
into Markdown or accessibility trees [37,7] and pruning HTML [30] improve
context management, agents with multi-step navigation still suffer from mis-
groundingandpoorstatetracking[1].Tobypassthesebottlenecks,researchhas
pivotedtowardexplicitAPI-callingforhallucination-freeexecution[26].Building
on these findings, rather than optimizing multi-step scraping for data discovery,
we restrict our agents to the search tools. By comparing agents querying dif-
ferent web ecosystem endpoints, we demonstrate that the metadata endpoint
natively solves “last mile” failure of data retrieval. This approach sidesteps the
computational overhead of multi-page scraping entirely while landing on a page
with actionable data.
Evaluating Dataset-Discovery Engines Unlike general web search, dataset
retrieval requires meeting specific spatial, temporal, and format constraints [22,
6]. The NTCIR tasks [15] formalized ad-hoc retrieval evaluation, yet focused
primarily on matching natural language queries to metadata for human con-
sumption. As consumers shift from humans to autonomous agents, findability
becomes a dead end without machine-actionable accessibility. Our work extends
theFAIRprinciples[34]intotheagenticdomain,evaluatingtheGoogleDataset
Searchecosystem[22,4,29]notmerelyasadiscoverytool,butasacriticalinfras-
tructure layer that solves the operational bottlenecks of autonomous execution.
Automated Evaluation and LLM-as-a-Judge Agentic tasks are inherently
open-ended.Thus,traditionalexact-matchmetricsandrigidlexicalcomparisons
fallshortofcapturingtruetasksuccess[18].Consequently,thefieldhasincreas-
inglyadoptedthe“LLM-as-a-judge” paradigm[36],leveragingthezero-shotrea-
soning capabilities of strong foundational models to evaluate complex outputs
against specialized rubrics. Frameworks such as MT-Bench [36] and G-Eval [19]
havedemonstratedthatLLMevaluatorsachievehighcorrelationwithhumanan-
notators,particularlyfornuancedsemantictasks.Inthecontextofdataretrieval,
human evaluation of FAIR compliance is prohibitively slow and subjective. By
explicitly mapping our multi-dimensional LLM-as-a-judge pipeline to the FAIR
principles,ourmethodologyextendstheautomatedevaluationparadigmbeyond
conversational fluency into the rigorous assessment of operational data utility.
Structured Metadata and the Semantic Web in LLMs. While pairing
LLMs with Knowledge Graphs (KGs) reduces hallucinations [24], existing eval-
uations often rely on closed, domain-specific KGs [14,9] or static RAG frame-
workswherenon-textualwebpagemetadataisinjectedprimarilyasapre-filtered
promptfeature[8].ThesedesignsreducetheLLMtoastaticsynthesizerofpro-
videdevidenceratherthananautonomousagenttaskedwithactiveinformation
discovery. Our work evaluates agent behavior across two architectures. In the
Baseline Agent, the agent actively navigates noisy search results to uncover real

|     |     |     | Do  | Data Agents | Need | Semantic | Metadata? | 5   |
| --- | --- | --- | --- | ----------- | ---- | -------- | --------- | --- |
datasets. In the Semantic Agent, metadata acts as a high-precision
schema.org
corpusfilterfordatasets,streamliningthehigh-entropytaskofautonomousdis-
covery. Comparing these modes isolates how semantic standards mitigate con-
| textual divergence |              | during | autonomous | data         | retrieval. |       |     |     |
| ------------------ | ------------ | ------ | ---------- | ------------ | ---------- | ----- | --- | --- |
| 3 System           | Architecture |        | &          | Experimental |            | Setup |     |     |
To isolate the impact of semantic metadata on dataset discovery, we designed
two nearly identical workflows. Rather than analyzing granular variables like
index size, we treat schema.org metadata as a filter that fundamentally shapes
| corpus composition, |     | search | scale, and | tool-execution |     | logic. |     |     |
| ------------------- | --- | ------ | ---------- | -------------- | --- | ------ | --- | --- |
Fig.1. Comparative System Architecture. Similar agent logic is evaluated across un-
structuredBaselineAgentandSemanticAgentdatasetsearchenvironments.Bothfeed
| a unified, FAIR-aligned |           | evaluation | of        | relevance, | accessibility, | and | utility. |     |
| ----------------------- | --------- | ---------- | --------- | ---------- | -------------- | --- | -------- | --- |
| 3.1 Agentic             | Framework |            | and Setup |            |                |     |          |     |
To ensure experimental parity, we contrast a Semantic Agent against a Base-
line Agent using identical underlying architectures (Figure 1)—specifically, the

| 6 S. | Chen | et al. |     |     |     |     |     |     |     |
| ---- | ---- | ------ | --- | --- | --- | --- | --- | --- | --- |
Agent Development Kit (ADK) [10] powered by Gemini 2.5 Pro. We isolate the
target corpus and its respective search ecosystem as the primary independent
variables. The agent prompts are highly symmetrical and tailored solely to op-
timize retrieval for their respective search environments, reflecting how users
| naturally | interact | with | these | platforms | 1.  |     |     |     |     |
| --------- | -------- | ---- | ----- | --------- | --- | --- | --- | --- | --- |
– Baseline Agent (Unstructured Corpus): The agent queries the Google
| Search     | index | via a         | standard | search | tool.         | Representing | the         | unstructured | web          |
| ---------- | ----- | ------------- | -------- | ------ | ------------- | ------------ | ----------- | ------------ | ------------ |
| ecosystem, |       | this baseline | corpus   |        | is a superset | of tens      | of billions |              | of web docu- |
ments,whereinclusionreliespurelyongeneralcrawlability.Tooptimizedata
retrieval,theagentexplicitlyappendsdata-seekingkeywords(e.g.,“dataset”)
totheuser’sintent.Thisqueryexpansionsimulatesreal-worldsearchbehav-
| ior, preventing |     | a trivially |     | weak | baseline | by ensuring | the | agent | successfully |
| --------------- | --- | ----------- | --- | ---- | -------- | ----------- | --- | ----- | ------------ |
targetsdataratherthangeneralwebcontent.Theretrievedpayloadconsists
| of URLs    | and | text  | snippets    | synthesized | from     | page | content. |         |            |
| ---------- | --- | ----- | ----------- | ----------- | -------- | ---- | -------- | ------- | ---------- |
|            |     |       |             |             |          | The  | agent    | queries | the Google |
| – Semantic |     | Agent | (Structured |             | Corpus): |      |          |         |            |
DatasetSearchindexviaametadatasearchtool.Representingthestructured
ecosystem,thiscuratedcorpusaggregatesallpageswithschema.org/Dataset
| markup. | To  | maintain | quality, |     | we use | a classification |     | model | to filter out |
| ------- | --- | -------- | -------- | --- | ------ | ---------------- | --- | ----- | ------------- |
roughly80%ofpageswithinvalidormisusedannotations[4].Theremaining
corpuscontains90milliondatasetmetadatarecords.Becausetheecosystem
| natively     | restricts  | results     |       | to dataset | entities,   | the query    |          | expansion | is redun-     |
| ------------ | ---------- | ----------- | ----- | ---------- | ----------- | ------------ | -------- | --------- | ------------- |
| dant.        | Therefore, | the         | agent | extracts   | the         | core keyword |          | to query  | the index     |
| directly     | without    | the         | need  | for query  | expansion.  |              |          |           |               |
| To eliminate |            | confounding |       | factors,   | both agents | are          | governed | by        | a set of con- |
trolled variables: (1) both utilize the same agentic framework (ADK) and un-
derlying Large Language Model (Gemini 2.5 Pro); (2) prompts restrict agents
to returning only datasets present in their tool-execution results, paired with
a model temperature of 0 to maximize factual adherence and reproducibility;
(3) agents are limited to returning a maximum of three highly relevant datasets
per query to standardize evaluation volume; (4) findings must be output as a
JSONarraywithdatasetname,andsourceURLtofacilitateautomatedevalua-
tion; and (5) agents must output a deterministic fallback (“No relevant datasets
| found.”) if    | no datasets |         | are discovered. |             |         |     |     |     |     |
| -------------- | ----------- | ------- | --------------- | ----------- | ------- | --- | --- | --- | --- |
| 3.2 Real-World |             | Indices |                 | vs. Curated | Corpora |     |     |     |     |
Wedeliberatelychoselive,web-scaleindices(GoogleSearchandGoogleDataset
Search)toevaluateagenticretrievalunderauthenticconditions.Whileweadopt
a query set from an established benchmark—specifically NTCIR-16—to ensure
areproducibleevaluationofgenuineuserintent,weexplicitlybypassthebench-
mark’s underlying static document collections. Rather than operating in arti-
ficially sanitized environments—such as the NTCIR-16 data collections them-
selves, fixed web crawls (e.g., ClueWeb22 [23]), or centralized, well-formatted
| 1 prompts: | https://doi.org/10.6084/m9.figshare.32141311 |     |     |     |     |     |     |     |     |
| ---------- | -------------------------------------------- | --- | --- | --- | --- | --- | --- | --- | --- |

|           |         |     |                                            | Do Data Agents   |            | Need Semantic             | Metadata? |              | 7   |
| --------- | ------- | --- | ------------------------------------------ | ---------------- | ---------- | ------------------------- | --------- | ------------ | --- |
|           |         |     | Table                                      | 1. Agent         | Comparison |                           |           |              |     |
| Component |         |     | Baseline                                   | Agent            |            | Semantic                  |           | Agent        |     |
| Agent     | / Model |     | ADKAgent/Gemini2.5ProADKAgent/Gemini2.5Pro |                  |            |                           |           |              |     |
| Target    | Index   |     | Google                                     | Search Index     |            | Google                    | Dataset   | Search Index |     |
| Inclusion | Filter  |     | General                                    | web crawlability |            | Semantic                  | metadata  | markup       |     |
| Corpus    | Scale   |     | Billions                                   | of web pages     |            | ∼90Milliondatasetmetadata |           |              |     |
Retrieved Payload URL and synthesized textURL and semantic metadata
|     |     |     | from web | pages |     |     |     |     |     |
| --- | --- | --- | -------- | ----- | --- | --- | --- | --- | --- |
dataset repositories (e.g., Zenodo, Hugging Face)—our approach forces agents
to navigate the messy, decentralized open web. Deploying these queries against
billions of live documents proves the system’s scalable, “in-use” viability. Fur-
thermore, live indices capture newly published data and real-world schema.org
| adoption,    | avoiding | the         | staleness | of static | corpora. |     |     |     |     |
| ------------ | -------- | ----------- | --------- | --------- | -------- | --- | --- | --- | --- |
| 4 Evaluation |          | Methodology |           |           |          |     |     |     |     |
To compare the two agents, we use a public benchmark for dataset retrieval,
develop evaluation metrics that explicitly address the FAIRness of the datasets,
| and design    | the | autoraters | to ensure | scalable, | low-variance |     | evaluations. |     |     |
| ------------- | --- | ---------- | --------- | --------- | ------------ | --- | ------------ | --- | --- |
| 4.1 Benchmark |     | Dataset    |           |           |              |     |              |     |     |
We evaluate our systems on the NTCIR-16 Data Search 2 dataset [15], an es-
tablished ad-hoc dataset retrieval benchmark spanning multiple domains like
economics,demographics,andpublichealth.Specifically,weusequeriesfromits
| Information | Retrieval     | (IR) | subtask. |             |               |     |           |        |     |
| ----------- | ------------- | ---- | -------- | ----------- | ------------- | --- | --------- | ------ | --- |
| From        | this subtask, | we   | isolated | the English | keyword-based |     | questions | (N=58) |     |
from the IR subtask to simulate the authentic data discovery intent. Because
these queries were crowdsourced from human workers tasked with expressing
real-world information needs derived from actual web pages, they simulate au-
thentic data discovery intent (e.g., “air quality baltimore”). Unlike synthetic or
verboseprompts,thesehumanqueriesarefrequentlyunderspecifiedandcontext-
dependent. Utilizing this query set forces the agents to navigate the genuine
complexities of matching user intent to dataset metadata, providing a realistic
| assessment     | of how | these   | systems | will perform | in  | production | environments. |     |     |
| -------------- | ------ | ------- | ------- | ------------ | --- | ---------- | ------------- | --- | --- |
| 4.2 Evaluation |        | Metrics |         |              |     |            |               |     |     |
We evaluate the agents for autonomous workflows across three FAIR-inspired
dimensions: discovering relevant web pages (Findable), ensuring programmatic
access (Accessible), and verifying the computational utility based on page types
(Interoperable/Reusable).

8 S. Chen et al.
– Relevance(Findable):EvaluatessemanticalignmentbetweentheNTCIR-
16 query and dataset scope, assigning a score from -1 to 2 (summarized in
Table2).Wedeliberatelyscore“ExploratoryMatches” asHighlyRelevant.In
real-world data discovery, users frequently issue broad queries that lack ex-
plicit geographic, temporal, or demographic constraints. Returning a highly
specificdatasetinresponsetoabroad,underspecifiedqueryprovestheagent
successfullynavigatedthecorrectsemanticdomainwithoutviolatinganyex-
plicit user constraints.
– Data Accessibility (Accessible):Measuresdataaccessibilityviaamulti-
levelrubric(Table3)toassesscomplexityofdataextractionandthepresence
of technical barriers.
– Dataset Page Type (Interoperable & Reusable): Measures compu-
tational utility by categorizing the dataset pages into a page type rubric
(summarized in Table 4).
Table 2. LLM Autorater Rubric for Scoring Query-to-Dataset Relevance.
ScoreClassification Description
2 Highly Relevant Containsrequesteddata(exactmatchorsuper-
set),orprovidesconcretedataforbroad,uncon-
strained exploratory queries.
1 Partially Relevant On-topic but incomplete or mismatched (e.g.,
wrong year/location, or a narrow subset of an
explicitly constrained query).
0 Irrelevant Entirely off-topic or unrelated to the query.
-1 Not Applicable The page is unreachable. The relevance cannot
be evaluated.
4.3 Autorater Execution
Autorater Evaluation Framework WeuseGemini2.5ProasanLLM-judge
toevaluateourthreemetrics.2 Ratherthanrelyingonagent-generatedsnippets,
the autoraters evaluate live content extracted directly from the agent-provided
URLsandserializedintoMarkdown.Toensurereproducibilityandpreventeval-
uation drift from link rot, we freeze this extracted content at query time and
provide it to the autoraters alongside the dataset payload from agent response.
Chain-of-Thought and Evidence Extraction. To prevent evaluation hallucina-
tions, autoraters follow a strict Chain-of-Thought (CoT) [33] protocol. Before
outputting a final rating, they must extract explicit evidence (e.g., quotes) from
2 prompts: https://doi.org/10.6084/m9.figshare.32141311

Do Data Agents Need Semantic Metadata? 9
Table 3. LLM Autorater Rubric for Scoring Data Accessibility Levels.
LevelClassification Description
6 Machine-Readable Containsdirectlinksorexportoptionstostructured
data files (e.g., .rdf, .ttl, .csv, .json) or API end-
points.
5 Structured Datainstructuredformats(e.g.,tables)ispresented
in a page requiring parsing but not NLP.
4 Unstructured Datapoints(e.g.,statistics,coordinates)areembed-
ded in prose, requiring NLP for extraction.
3 Presentation-Bound Data is confined to static images, non-machine-
readable documents, or interactive visual interfaces
2 Non-Data Page is reachable but lacks data.
1 Unreachable Page is unreachable (e.g., 403/404 errors).
Table 4. LLM Autorater Classification Rubric for Retrieved Dataset Page Types.
Classification Description
DATA_REGISTRY Dataset landing pages with interoperable metadata
records (e.g., DOIs, data dictionaries, provenance).
RAW_DATA Machine-readable files (e.g., .rdf, .csv) or APIs.
DATA_EXPLORER Interactive interfaces (e.g., dashboards, dynamic
maps) or standalone charts without metadata.
DATA_NARRATIVE Prose-heavy content using data to support story-
telling (e.g., papers, news articles, reports).
DISCOVERY_PORTAL Gatewaysorsearchcatalogsforqueryingacrossmul-
tiple distinct datasets.
NO_DATA Generalwebcontentlackingaspecificdatasetfocus
(e.g., organizational homepages, marketing).
UNREACHABLE Page is unreachable (e.g., 403/404 errors).
the serialized snapshot and map it to the rubric. This ensures evaluations are
grounded in the scraped content rather than the model’s parametric memory.
Relevance Prompt Design. Our relevance evaluation adapts the UMBRELA
prompt [32], leveraging its few-shot examples and structured reasoning to dis-
tinguish between superficial mentions and primary data sources. To align with
theNTCIR-16DataSearchbenchmark,weconvertedUMBRELA’soriginal1–3
scale to a 0–2 ranking. This maps our outputs directly to established human-
labeledgroundtruthswhilepreservingtheframework’szero-shotreasoningstrengths.
Autorater Validation and Manual Review

10 S. Chen et al.
Autorater Validation. To validate our autoraters, two authors independently
annotatedadiverse11%sampleofquery-retrievalpairstoestablisha“goldset.”
Prior to analysis, we excluded non-ordinal ’Unreachable’ categories. We then
mapped the autorater’s classifications to progressive ordinal scales for relevance
andaccessibilityandandderivedthescaleforcomputationalutilitydirectlyfrom
the dataset page type.We evaluated agreement using Linear-Weighted Cohen’s
Kappa (κ) to penalize minor ordinal mismatches less severely than major ones.
Human annotators achieved high reliability, with Kappa scores of 0.70 (Page
Type), 0.93 (Accessibility), and 0.95 (Relevance), resolving discrepancies via
consensus.ComparingtheautoratertothisgoldsetyieldedstrongKappascores
of 0.73, 0.78, and 0.74, respectively, demonstrating close alignment with human
judgment.
ManualEvaluationforEdgeCases. Approximately31%ofretrievalswererouted
toahumanevaluationpipeline(29%fromBaselineAgentand33%fromSeman-
ticAgent).AsdiscussedinSection7,ourinternalscrapersometimesencounters
complex layouts or security policies, classifying these scraping errors as “Unde-
termined” and flagging them for review. To avoid selection bias from discarding
theseedgecases,twoauthorsindependentlyannotatedthissubset.Weevaluated
inter-rater reliability using Linear-Weighted Cohen’s Kappa, achieving scores of
0.72 (Dataset Type), 0.88 (Accessibility), and 0.70 (Relevance). Following con-
sensus resolution, these human-annotated labels were integrated into the final
dataset, ensuring a complete and statistically sound evaluation of both actual
data availability and accessibility.
5 Results
We now present the experimental outcomes of our comparative analysis across
the 58 English keyword-based queries from the NTCIR-16 dataset. The Base-
line Agent answered 56 queries, retrieving 164 datasets. The Semantic Agent
answered 40 queries, retrieving 112 datasets.
5.1 Relevance
Both systems exhibited similar performance in retrieving datasets (Figure 2)
relevanttothequestions.Forthe“HighlyRelevant” (Score2),theBaselineAgent
retrieved 99 datasets (60.4%), while the Semantic Agent retrieved 68 datasets
(60.7%).
5.2 Data Accessibility
The Semantic Agent demonstrated a significant accessibility advantage, return-
ing pages with machine-readable data in 71.4% of retrievals compared to 48.7%
for the Baseline Agent. Accounting for the differences in total retrieval volumes,
this represents a 46.6% relative increase in precision (Figure 3). By leveraging

|     |                   | Do     | Data Agents   | Need Semantic | Metadata? | 11  |
| --- | ----------------- | ------ | ------------- | ------------- | --------- | --- |
|     | Fig.2. Comparison | of the | agent results | by relevance  | scores.   |     |
semantic metadata, the agent avoided non-computational roadblocks, achieving
relativereductionsof46.6%inNarrative/UnstructuredData(dataembeddedin
narrative prose), 62.9% in Presentation-Bounded Data (pages with only charts
or interactive dashboards, without metadata), and 76.3% in Non-Data (false
| positive | pages lacking data | entirely).   |         |                       |        |     |
| -------- | ------------------ | ------------ | ------- | --------------------- | ------ | --- |
|          | Fig.3. Comparison  | of the agent | results | by data accessibility | levels |     |
| 5.3      | Dataset Page Type  |              |         |                       |        |     |
Thedistributionofretrieveddatasettypepagesvariedbetweenthetwosystems
(Figure4).TheSemanticAgent’sresultsconsistedprimarilyofDATA_REGISTRY
entries. These accounted for 88.4% of its total retrievals compared to 61.0% for
the Baseline Agent, yielding a 44.9% relative increase in precision. While the
Baseline Agent retrieved a wider variety of alternative page types, the Semantic

| 12  | S. Chen et al. |     |     |     |
| --- | -------------- | --- | --- | --- |
Agent streamlined this distribution by achieving relative reductions of 86.6% in
DATA_NARRATIVE pages (prose-heavy pages, such as news articles or aca-
demic papers discussing data), 55.7% in DATA_EXPLORER pages (data ex-
plorationpageswithoutmetadata),and100%inDISCOVERY_PORTALpages
| (search     | engines or gateways | for multiple | datasets).               |           |
| ----------- | ------------------- | ------------ | ------------------------ | --------- |
|             | Fig.4. Comparison   | of the       | agent results by dataset | page type |
| 5.4 Agentic | FAIRness            |              |                          |           |
To evaluate an agent’s capacity to identify machine-actionable registry entries
that ensure metadata compliance and direct data accessibility. We define a
dataset as fully “FAIR-compliant” if it achieves a perfect composite score across
three criteria: a relevance score of 2 (Highly Relevant), Dataset Accessibility at
| Level 6 | (Machine-Readable), | and Dataset | Page Type | of DATA_REGISTRY. |
| ------- | ------------------- | ----------- | --------- | ----------------- |
Dataset-Level Precision Toassesstheoverallprecisionoftheretrieveddata,
we measured the dataset-level success rate—the proportion of FAIR-compliant
dataset URLs out of the total number of URLs retrieved by each system across
allqueries.TheBaselineAgentachieveda28.0%precisionrate(46of164URLs).
In contrast, the Semantic Agent achieved a precision of 46.4% (52 of 112 URLs,
p < 0.01). This represents a 65.7% relative improvement, demonstrating that
nearly half of the Semantic Agent’s retrievals met the most strict FAIR criteria.
|             |                | To  | evaluate the signal-to-noise | ratio, we mea- |
| ----------- | -------------- | --- | ---------------------------- | -------------- |
| Query-Level | Result Density |     |                              |                |
suredtheconcentrationofFAIR-compliantdatasetsperansweredquery,capped
at a maximum of 3 results per question. The Semantic Agent achieved a result
density of 1.30 (52 FAIR-compliant dataset URLs / 40 answered queries), uti-
lizing43.3%ofitstop-3capacity.TheBaselineAgentmanagedadensityof0.82
(46FAIR-compliantURLs/56answeredqueries),achievinga27.4%utilization
rate.Duetothequerysize,thisdifferencelacksstatisticalsignificance(p>0.05).

|              |     |     |        | Do  | Data Agents | Need | Semantic | Metadata? | 13  |
| ------------ | --- | --- | ------ | --- | ----------- | ---- | -------- | --------- | --- |
| 6 Discussion |     | and | Future |     | Work        |      |          |           |     |
Basedonourfindings,werevisitourcorehypotheses,discusspracticalstrategies
for autonomous agents navigating gated and constrained data, and propose a
hybridpathbalancinghigh-precisionactionabilitywithbroadexploratoryreach.
| 6.1 Actionability, |     |     | Utility, | and | Breadth |     |     |     |     |
| ------------------ | --- | --- | -------- | --- | ------- | --- | --- | --- | --- |
WenowreturntoourthreekeyhypothesesinSection1:dataactionability,last-
mile utility, and exploratory breadth. The Semantic Agent achieves superior
precisionbyretrievingmachine-actionabledataforautonomousexecution.Con-
versely, while the Baseline Agent prioritizes exploratory breadth, it frequently
fails at the “last mile” of data retrieval, where unstructured noise hinders au-
| tonomous | action. |     |     |     |     |     |     |     |     |
| -------- | ------- | --- | --- | --- | --- | --- | --- | --- | --- |
Ourresultsvalidatethedata-actionabilityhypothesis:the
Data Actionability
Semantic Agent demonstrated an advantage in navigating to these metadata-
rich registries. More importantly, the Semantic Agent was more successful at
| identifying | pages | with    | machine-readable |              | download |       | links.    |             |     |
| ----------- | ----- | ------- | ---------------- | ------------ | -------- | ----- | --------- | ----------- | --- |
|             |       |         |                  | The Baseline | Agent    | often | retrieves | prose-heavy | web |
| The “Last   | Mile” | Utility |                  |              |          |       |           |             |     |
pages and navigational portals. Navigating and scraping these unstructured
sources makes it harder for agents to isolate the actionable data. Specifically,
web DOM syntactic noise causes severe token bloat, while dense prose degrades
the context window, triggering retrieval failures [17]. Additionally, portals trap
agents in redundant search loops instead of delivering data payloads directly[1].
Our results support this “Last Mile” utility hypothesis: while open-web agents
| can discover | the | relevant | pages, | they | fail to | locate | actionable | data. |     |
| ------------ | --- | -------- | ------ | ---- | ------- | ------ | ---------- | ----- | --- |
Exploratory Breadth The Baseline Agent answered more questions than the
SemanticAgentduetothelimitedadoptionof schema.orgmarkup.Thisbroader
coverage is most pronounced in the web’s “long tail”— research domains and
| repositories | where | dataset | pages | often | lack | schema.org | annotations. |     |     |
| ------------ | ----- | ------- | ----- | ----- | ---- | ---------- | ------------ | --- | --- |
Precision and Agentic Actionability In contrast to recall, the Semantic
Agent method showed a clear precision advantage over the Baseline Agent in
retrieving FAIR-compliant datasets. For an autonomous agent, this advantage
translates to a “fail-fast” mechanism that favors an empty state over a proba-
| bilistic guess, | preventing |          | downstream |     | execution  | failures. |     |     |     |
| --------------- | ---------- | -------- | ---------- | --- | ---------- | --------- | --- | --- | --- |
| 6.2 Autonomy    |            | Strategy |            | for | Gated Data |           |     |     |     |
Real-world data discovery frequently encounters paywalls and authentication
barriers. FAIR principles recognize these controls as standard research logistics

| 14 S. | Chen et | al. |     |     |     |     |
| ----- | ------- | --- | --- | --- | --- | --- |
rather than metadata failures—mandating that data remain “as open as possi-
ble, as closed as necessary” [20]. Rather than treating these barriers as absolute
roadblocks,anautonomystrategycanemployHuman-in-the-Loop(HITL)hand-
offs[13].Anagentusesstructuredmetadatatoverifyadataset’sutility,identifies
the access blocker, and pauses to request human intervention for credentials or
payment. Once the human clears the blocker, the agent resumes autonomously
| downloading | and | parsing the   | machine-readable | payload. |     |     |
| ----------- | --- | ------------- | ---------------- | -------- | --- | --- |
| 6.3 Scaling | to  | Multi-Faceted | Queries          |          |     |     |
While our evaluation utilized keyword-based queries, it presents a compelling
opportunity to explore complex, multi-faceted natural language queries. Eval-
uating the systems under metadata constraints exposes a contrast in their un-
derlying mechanics. To satisfy specific constraints in an unstructured ecosys-
tem, the Baseline Agent must rely on probabilistic retrieval to identify candi-
date URLs, followed by high-friction scraping and parsing to verify attributes.
Conversely, because structured corpora natively index explicit semantic prop-
erties (e.g., license, dataType), the Semantic Agent translates multi-faceted
constraints directly into a native tool call with deterministic filter and reduces
post-hocverificationoverhead.Asillustratedbelow,amulti-facetednaturallan-
| guage query   | can     | be converted  | into a metadata-constrained |             | tool call:   |     |
| ------------- | ------- | ------------- | --------------------------- | ----------- | ------------ | --- |
| Multi-faceted |         | Query:        |                             |             |              |     |
| “Find         | tabular | datasets      | on household                | consumption | data updated |     |
| within        | the     | last 3 months | with non-commercial         |             | licensing”   |     |
| Metadata      |         | Tool call:    |                             |             |              |     |
search_datasets(
|     | keywords="household |     | consumption", |     |     |     |
| --- | ------------------- | --- | ------------- | --- | --- | --- |
|     | last_updated="3     |     | months",      |     |     |     |
license="noncommercial",
dataType="tabular")
| 6.4 Hybrid | Path |     |     |     |     |     |
| ---------- | ---- | --- | --- | --- | --- | --- |
Thechoicetousesemanticmetadatashouldbedrivenbytheagent’sprimaryob-
jective:breadthofknowledgeversusreliabilityofaction.Discovery-orientedtasks
(e.g.,exploratoryresearch)requireunstructuredsystemstoachievebroadopen-
webrecall,thoughthisapproachintroduceshighernoisethatnecessitatesgreater
computational overhead or human intervention. Conversely, autonomous work-
flows (e.g., real-time analytics, code generation) require a semantic-metadata
approach to guarantee machine-actionability, as false positives are far costlier
| than empty | states. |             |             |              |                     |     |
| ---------- | ------- | ----------- | ----------- | ------------ | ------------------- | --- |
| To bridge  | the     | gap between | reliability | and breadth, | we propose a hybrid | ar- |
chitecture. Under this model, agents first query the high-precision semantic-

|     |     |     | Do Data | Agents Need Semantic | Metadata? | 15  |
| --- | --- | --- | ------- | -------------------- | --------- | --- |
metadata layer. If this initial search yields an empty state, the system falls back
| to the unstructured |     | approach | to cast | a wider net. |     |     |
| ------------------- | --- | -------- | ------- | ------------ | --- | --- |
7 Limitations
Our work has several limitations, specifically corpus coverage, ranking mecha-
| nisms, web | scraping | constraints, | and | queryset scale. |     |     |
| ---------- | -------- | ------------ | --- | --------------- | --- | --- |
Coverage of the Structured Corpus. Our evaluation of the structured ecosys-
tem is limited to the Google Dataset Search index (90 million records), which
represents only a fraction of global data. Because inclusion strictly requires
schema.org/Dataset or DCAT markup, our study excludes dataset pages us-
ingalternativemarkupvocabulariesorlackingsemanticannotation.Ultimately,
thisstrictfilteringensuresoperationalreliabilitybuttradesawayabsoluterecall
| and exploratory |     | breadth | of the open web. |     |     |     |
| --------------- | --- | ------- | ---------------- | --- | --- | --- |
Proprietary Ranking Mechanisms. Google Search and Google Dataset Search
share the core infrastructure, but their internal ranking mechanisms remain
“black boxes.” Rather than isolating this algorithmic delta, our evaluation mea-
sures end-to-end utility—assessing the empirical advantage of participating in
| the structured | data | ecosystem | versus | relying on the unstructured | web. |     |
| -------------- | ---- | --------- | ------ | --------------------------- | ---- | --- |
Automated Scraping. Our internal scraper has limitations that prevent it from
processingcomplexweblayoutsandpenetratingenterprise-levelsecuritypolicies.
Asaresult,theautoraterscouldnotevaluate31%ofthepages.Wesubsequently
directedthissubsettoahumanevaluationpipeline(4.3)tomitigatebias,inorder
topreventthescrapingconstraintsfromskewingevaluationresults.Futurework
| could mitigate | this   | limitation | by using     | advanced scraping    | tools.               |     |
| -------------- | ------ | ---------- | ------------ | -------------------- | -------------------- | --- |
|                |        | Although   | our queryset | yields statistically | significant dataset- |     |
| Queryset       | Scale. |            |              |                      |                      |     |
level metrics, its size may not fully capture the extreme diversity of the web’s
“long tail.” Furthermore, the query limits generalizability to the multi-faceted
queries discussed in 6.3. Future work should employ larger, cross-disciplinary
| datasets | to comprehensively |     | evaluate | agentic retrieval. |     |     |
| -------- | ------------------ | --- | -------- | ------------------ | --- | --- |
8 Conclusion
Autonomous workflows shift the primary focus of system utility from discov-
ery to computational actionability. While unstructured retrieval supports broad
exploratory tasks, structured ecosystems remain the indispensable foundation
for reliable, execution-oriented autonomous workflows. In the agentic paradigm,
the FAIR principles have transitioned from human-centric best practices into
technical requirements. The structured data ecosystem fuels the autonomous
data-drivenworkflow,significantlyincreasingtheprobabilitythatretrieveddata
| assets are | not just | findable, | but instantly | machine-actionable. |     |     |
| ---------- | -------- | --------- | ------------- | ------------------- | --- | --- |

16 S. Chen et al.
9 Use of Generative AI
We used Gemini to generate initial drafts of some sections based on our dis-
cussion notes, as well as a copy-editing tool to improve grammar and overall
readability throughout the manuscript. In addition, we used the model to criti-
cally review early drafts, incorporating its feedback to refine our arguments and
restructure the narrative flow.
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